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Common terms and phrasesalgorithms alignment analysis applications approach associated Bayesian bio-ontology Biol biomedical BLSOM BMC Bioinformatics cancer cell common complex computational curation data set database disease documents domain entities European Bioinformatics Institute example experimental expression data extraction Figure functional modules gene expression Gene Ontology genes or proteins genetic genome sequence GO annotations GO terms graph groups high-throughput identify infer integration interaction networks interactome InterPro KEGG knowledge discovery large number large-scale literature manual annotation mapping metabolic metagenomic microarray modular molecular networks motifs multiple nodes novel Nucleic Acids Nucleic Acids Res organelle phenotypes phylogenetic PPI networks prediction prokaryotic protein function protein interaction protein sequences protein-protein interactions proteomics pseudogene query Reactome Rebholz-Schuhmann regulatory networks relations relationships relevant represent retrieval samples semantic Semantic Web sources species statistical structure systems biology text mining tion transcription factor transcriptional types UniProt UniProtKB users visualization yeast Bibliographic information
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