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Models and their Roles in Biology
Some Tools for Computer Simulation
Basic Principles of Biological Organization
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A-site Aa-tRNA adhesion algorithm allowed amino acid angles anticodon assembly assume automata bacteriophage barrier basic binding Biol biological systems blastomeres bond sites calculated structure cell wall cellular cellular automaton Chapter codon codon-anticodon combine compaction complex configuration conformational change coordinates corresponding defined discussed display distance EF-TU embryo enzyme evolutionary optimization example Figure fitness function formation free energy genes genetic given globular proteins graphics hydrogen bonds hydrophobic ID numbers information content inner cell interactions internal involved iterations language large number MFA models minimization molecular molecules morula mRNA mutations node number of cells occur organisms P-site tRNA pairs parameters patterns phage polypeptide chain possible probability proofreading protein biosynthesis protein folding protein molecules random represent residues ribosome rotation self-organization sequence specific steps subunits surface elements surface energy tertiary structure theory three-dimensional tion tissues translocation transpeptidation tRNA units vertical