Perl Programming for Medicine and Biology
Written for biomedical professionals and hospital practitioners interested in creating their own programs, Perl Programming for Medicine and Biology, discusses and reviews biomedical data resources, data standards, data organization, medicolegal and ethical conduct for data miners, and grants-related data sharing responsibilities. It teaches readers the basic Perl programming skills necessary for collecting, analyzing, and distributing biomedical data and provides solutions to in-depth problems that face researchers and healthcare professionals.
Non-technical "Background" sections open each chapter to help non-programmers easily comprehend programming procedures. Explanations are provided for the biomedical issues underlying the Perl scripts that follow, and examples of real-world implementation are provided. Perl Programming for Medicine and Biology will show you how to transform, merge, and examine large and complex databases with ease.
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Introduction to Perl Programming For Absolute Beginners
Using Perl Modules and Applying Some Fundamental Commands
FileDirectory Operations and Text transformations with Regular
Autocoding Biomedical Data with Nomenclatures
Searching and Mining Data
Cryptography and Deidentification
Modeling Biological and Medical Systems
A Quick Peek at ObjectOriented Programming
A Digital Image Specification in RDF
Data Mining OMIM Online Mendelian Inheritance
algorithm annotation ASCII assigned associative array autocode binary BioPerl block cancer carcinoma CDEs cell character string clinical command contains count «rdf create data elements data object database datasets datatype described Description rdf domain doublet downloaded Dublin Core e-mail example exit extract filename foreach function gene Glossary identifier Informatics input Jules Berman loop LSID match mesh metadata method neoplasm nomenclature occur OMIM one-way hash open source open TEXT operator output palindrome parse parser pathology patient pattern Perl modules Perl script phrase POSIX prostate protocol PubMed query RDF document RDF schema records regex regular expression scrubbing sentence sequence server Similar Similar Similar software agents standard subdirectory subroutine syntax tells Perl text file TEXTX tissue transform triples tumor UMLS UMLS Metathesaurus usr/local/bin/perl variable vocabulary word XML file XML schema xmlins Zipf distribution